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POPTR_0004s05730.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0004s05730.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0004s05730.1Predicted protein (76 aa)    
Predicted Functional Partners:
POPTR_0003s00500.1
Predicted protein (90 aa)
   
  0.995
POPTR_0009s16660.1
Predicted protein (310 aa)
   
  0.990
POPTR_0004s21400.1
Predicted protein (343 aa)
   
  0.990
POPTR_0019s14100.1
Predicted protein (228 aa)
   
  0.990
POPTR_0013s14520.1
Predicted protein (228 aa)
   
  0.990
POPTR_0003s16060.1
Predicted protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (272 aa)
   
  0.990
POPTR_0001s12960.1
Predicted protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (275 aa)
   
  0.990
ndhA
NADH-plastoquinone oxidoreductase subunit 1 ; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (68 aa)
     
 
  0.986
POPTR_0010s06340.1
Uncharacterized protein (94 aa)
   
 
  0.980
POPTR_0016s11450.1
Predicted protein (282 aa)
   
 
  0.976
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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