• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GA2ox3 protein (Populus trichocarpa) - STRING interaction network
"GA2ox3" - Truncated Gibberellin 2-oxidase family protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GA2ox3Truncated Gibberellin 2-oxidase family protein; Gibberellin 2-oxidase [source-UniProtKB/TrEMBL;Acc-B9H2B5_POPTR]; Belongs to the iron/ascorbate-dependent oxidoreductase family (332 aa)    
Predicted Functional Partners:
POPTR_0007s05340.1
Uncharacterized protein (358 aa)
           
  0.790
POPTR_0004s22670.1
Uncharacterized protein (388 aa)
           
  0.790
GA20ox8
Gibberellin 20-oxidase family protein; Giberellin 20-oxidase [source-UniProtKB/TrEMBL;Acc-A7XAE3_POPTR]; Belongs to the iron/ascorbate-dependent oxidoreductase family (385 aa)
   
   
0.752
POPTR_0022s00470.3
Amine oxidase family protein (579 aa)
           
  0.743
CYP97C4
Uncharacterized protein; Cytochrome P450 [source-UniProtKB/TrEMBL;Acc-B9MTJ7_POPTR] (545 aa)
           
  0.743
GA3ox2
Gibberellin 3-beta-hydroxylase family protein; Gibberellin 3-oxidase [source-UniProtKB/TrEMBL;Acc-B9GWQ8_POPTR]; Belongs to the iron/ascorbate-dependent oxidoreductase family (373 aa)
   
   
0.738
POPTR_0006s26380.1
annotation not available (183 aa)
   
   
0.728
GA20ox6
Gibberellin 20-oxidase [source-UniProtKB/TrEMBL;Acc-B9I4H1_POPTR]; Belongs to the iron/ascorbate-dependent oxidoreductase family (385 aa)
   
   
0.720
GA3ox4
Gibberellin 3 beta-hydroxylase family protein; Gibberellin 3-oxidase [source-UniProtKB/TrEMBL;Acc-B9IKS1_POPTR]; Belongs to the iron/ascorbate-dependent oxidoreductase family (341 aa)
         
0.709
GA20ox7
Gibberellin 20-oxidase [source-UniProtKB/TrEMBL;Acc-B9IC40_POPTR]; Belongs to the iron/ascorbate-dependent oxidoreductase family (384 aa)
   
   
0.706
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (8%) [HD]