Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
annotation not available (323 aa)
Predicted Functional Partners:
Aminophospholipid ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily (1107 aa)
Uncharacterized protein (1082 aa)
annotation not available (1110 aa)
Aminophospholipid ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily (1098 aa)
Uncharacterized protein (332 aa)
GTP-binding family protein (238 aa)
GTP-binding family protein (234 aa)
Zinc finger family protein (393 aa)
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family (342 aa)
Uncharacterized protein (318 aa)
Your Current Organism:
NCBI taxonomy Id: 3694 Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar