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POPTR_0004s09310.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0004s09310.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
POPTR_0004s09310.1Predicted protein (1142 aa)    
Predicted Functional Partners:
POPTR_0009s04560.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
   
  0.995
POPTR_0001s25490.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
   
  0.995
POPTR_0018s12080.1
Predicted protein (726 aa)
     
   
  0.994
POPTR_0006s20300.1
Predicted protein (726 aa)
     
   
  0.994
POPTR_0001s41800.1
Predicted protein (747 aa)
     
  0.988
POPTR_0014s06530.1
Predicted protein; Single-stranded DNA-dependent ATP-dependent helicase (700 aa)
     
  0.988
POPTR_0002s14910.1
ATP-dependent DNA helicase 2 subunit KU80 ; Single-stranded DNA-dependent ATP-dependent helicase (656 aa)
     
  0.988
POPTR_0014s07330.1
Predicted protein (615 aa)
     
  0.988
POPTR_0015s13250.1
Predicted protein (541 aa)
     
  0.987
POPTR_0013s00270.1
Uncharacterized protein ; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts [...] (360 aa)
     
  0.987
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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