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STRINGSTRING
SGA901 protein (Populus trichocarpa) - STRING interaction network
"SGA901" - Silencing group A protein [source:UniProtKB/TrEMBL in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGA901Silencing group A protein [source-UniProtKB/TrEMBL;Acc-B9H343_POPTR] (190 aa)    
Predicted Functional Partners:
POPTR_0007s03930.1
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (450 aa)
     
 
  0.997
HAG907
Uncharacterized protein; Histone acetyltransferase [source-UniProtKB/TrEMBL;Acc-B9I6D2_POPTR] (463 aa)
     
 
  0.995
POPTR_0007s12020.1
Uncharacterized protein (458 aa)
     
 
  0.993
POPTR_0005s13910.2
Uncharacterized protein (470 aa)
     
 
  0.993
POPTR_0019s03130.1
Minichromosome maintenance family protein; Belongs to the MCM family (738 aa)
     
 
  0.987
POPTR_0013s09210.1
annotation not available (612 aa)
     
 
  0.987
POPTR_0001s35950.1
annotation not available (359 aa)
     
 
  0.987
POPTR_0001s12700.1
DNA helicase; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P972_POPTR]; Belongs to the MCM family (941 aa)
     
 
  0.987
POPTR_0014s11610.1
DNA helicase; Belongs to the MCM family (718 aa)
     
 
  0.978
POPTR_0009s14710.1
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle (1040 aa)
     
 
  0.972
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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