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POPTR_0004s09910.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0004s09910.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
POPTR_0004s09910.1Predicted protein; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (182 aa)    
Predicted Functional Partners:
rbcL
Ribulose bisphosphate carboxylase large chain [source-UniProtKB/Swiss-Prot;Acc-RBL_POPTR]; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site (70 aa)
 
 
  0.998
POPTR_0010s04010.1
Uncharacterized protein (114 aa)
 
 
  0.998
POPTR_0013s10840.1
Hypothetical protein (42 aa)
     
  0.970
POPTR_0003s09830.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGT2_POPTR] (405 aa)
   
 
  0.952
POPTR_0008s08410.1
Predicted protein (481 aa)
   
 
  0.951
POPTR_0010s17860.1
Predicted protein (481 aa)
   
 
  0.950
POPTR_0001s01630.1
Predicted protein (405 aa)
   
 
  0.943
POPTR_0016s09300.1
Predicted protein (606 aa)
   
 
  0.936
POPTR_0010s17870.1
Predicted protein (401 aa)
   
 
  0.936
POPTR_0008s08400.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P828_POPTR] (401 aa)
   
 
  0.936
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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