STRINGSTRING
POPTR_0004s10050.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0004s10050.1" - Annotation not available in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0004s10050.1Annotation not available (668 aa)    
Predicted Functional Partners:
POPTR_0016s10090.1
GAMMA-ADAPTIN 1 family protein (159 aa)
     
 
  0.672
POPTR_0004s24340.1
Predicted protein (980 aa)
     
 
  0.671
POPTR_0016s10100.1
Annotation not available (700 aa)
     
 
  0.663
POPTR_0006s09390.1
Predicted protein (877 aa)
     
 
  0.663
POPTR_2006s00200.1
Uncharacterized protein (143 aa)
     
 
  0.619
POPTR_0006s25970.1
Predicted protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (842 aa)
     
 
  0.619
POPTR_0003s13040.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PH57_POPTR]; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (904 aa)
     
 
  0.619
POPTR_0001s09660.1
Predicted protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (904 aa)
     
 
  0.619
POPTR_0017s06050.1
Predicted protein (570 aa)
     
      0.553
POPTR_0009s11430.1
Predicted protein (591 aa)
     
      0.553
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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