STRINGSTRING
POPTR_0004s13700.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0004s13700.1" - Predicted protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0004s13700.1Predicted protein (130 aa)    
Predicted Functional Partners:
POPTR_0006s07950.1
Predicted protein (129 aa)
     
   
  0.537
POPTR_0010s15740.1
Predicted protein; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (192 aa)
     
   
  0.535
POPTR_0008s10290.1
Hypothetical protein; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (101 aa)
     
   
  0.535
POPTR_0007s07470.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P9R0_POPTR] (158 aa)
     
   
  0.493
POPTR_0005s09240.1
Predicted protein (158 aa)
     
   
  0.480
POPTR_0008s10300.1
Annotation not available (161 aa)
     
   
  0.439
POPTR_0017s04420.1
Uncharacterized protein (354 aa)
           
  0.424
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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