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POPTR_0004s14960.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0004s14960.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0004s14960.1Predicted protein (1091 aa)    
Predicted Functional Partners:
POPTR_0010s04790.1
Predicted protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (393 aa)
       
      0.867
POPTR_0008s19680.1
Predicted protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (393 aa)
       
      0.867
POPTR_0002s18020.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PF50_POPTR]; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (442 aa)
       
      0.867
POPTR_0005s16540.1
Predicted protein (2268 aa)
     
      0.798
POPTR_0002s09330.1
Predicted protein (2276 aa)
     
      0.798
POPTR_0005s04880.1
Uncharacterized protein (487 aa)
     
 
  0.698
POPTR_0015s03500.1
Uncharacterized protein (137 aa)
     
      0.691
POPTR_0004s23270.1
Predicted protein (587 aa)
     
      0.691
POPTR_0010s13650.1
Predicted protein (464 aa)
     
      0.623
POPTR_0013s11870.1
Predicted protein (462 aa)
     
      0.622
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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