STRINGSTRING
POPTR_0004s16860.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0004s16860.1" - Predicted protein in Populus trichocarpa
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
POPTR_0004s16860.1Predicted protein (327 aa)    
Predicted Functional Partners:
POPTR_0015s10040.1
Jumonji domain protein [source-UniProtKB/TrEMBL;Acc-B9IF38_POPTR] (1630 aa)
       
  0.759
POPTR_0012s09390.1
Predicted protein (1672 aa)
       
  0.759
POPTR_0010s23160.1
Uncharacterized protein (1627 aa)
       
  0.759
POPTR_0008s03760.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-B9HLJ5_POPTR] (1150 aa)
       
  0.759
POPTR_0007s12130.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9HEL3_POPTR] (1517 aa)
     
  0.755
POPTR_0005s13810.1
SET domain protein [source-UniProtKB/TrEMBL;Acc-B9H699_POPTR] (1428 aa)
     
  0.755
POPTR_0002s12010.1
Predicted protein (252 aa)
     
  0.723
POPTR_0014s01760.1
Predicted protein (238 aa)
     
  0.718
POPTR_0002s26430.1
Uncharacterized protein (501 aa)
     
  0.717
POPTR_1833s00200.1
Annotation not available (77 aa)
       
  0.710
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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