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STRINGSTRING
MYB099 protein (Populus trichocarpa) - STRING interaction network
"MYB099" - Predicted protein [source:UniProtKB/TrEMBL in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYB099Predicted protein [source-UniProtKB/TrEMBL;Acc-B9N863_POPTR] (378 aa)    
Predicted Functional Partners:
NAC025
NAC domain protein, IPR003441 [source-UniProtKB/TrEMBL;Acc-B9HFJ5_POPTR] (350 aa)
           
  0.681
NAC039
Transcription factor; NAC domain protein, IPR003441 [source-UniProtKB/TrEMBL;Acc-B9MXI6_POPTR] (342 aa)
           
  0.681
POPTR_0003s12700.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002304457.1] (491 aa)
           
  0.599
POPTR_0001s09340.1
Uncharacterized protein (526 aa)
           
  0.599
POPTR_0018s09140.1
Casein kinase family protein; Belongs to the protein kinase superfamily (424 aa)
     
   
  0.556
POPTR_0014s15740.1
Photoregulatory zinc-finger protein COP1 (672 aa)
       
 
  0.552
POPTR_0011s00900.1
Uncharacterized protein (607 aa)
       
 
  0.552
POPTR_0004s00430.1
annotation not available (406 aa)
       
 
  0.552
POPTR_0018s11020.1
Uncharacterized protein (356 aa)
           
  0.491
GRAS46
Uncharacterized protein; GRAS family transcription factor LATERAL [source-UniProtKB/TrEMBL;Acc-B9IDL7_POPTR]; Belongs to the GRAS family (434 aa)
     
 
  0.475
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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