STRINGSTRING
POPTR_0004s23490.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0004s23490.1" - Gamma class glutathione transferase EF1Bgamma2 in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0004s23490.1Gamma class glutathione transferase EF1Bgamma2 (422 aa)    
Predicted Functional Partners:
POPTR_0789s00210.1
Predicted protein (96 aa)
     
 
  0.999
POPTR_0789s00200.1
Predicted protein (260 aa)
     
 
  0.999
POPTR_0019s14570.1
Uncharacterized protein (118 aa)
     
 
  0.999
POPTR_0019s14560.1
Predicted protein (96 aa)
     
 
  0.999
POPTR_0007s14040.1
Predicted protein (217 aa)
     
 
  0.999
POPTR_0005s11780.1
Predicted protein (260 aa)
     
 
  0.999
POPTR_0015s10630.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PD73_POPTR] (230 aa)
     
  0.999
POPTR_0012s09840.1
Predicted protein (231 aa)
     
  0.999
POPTR_0009s02370.1
Predicted protein (225 aa)
     
  0.999
POPTR_0001s23190.1
Predicted protein (224 aa)
     
  0.999
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
Server load: low (10%) [HD]