STRINGSTRING
POPTR_0004s23770.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0004s23770.1" - Auxin response factor in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
POPTR_0004s23770.1Auxin response factor ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (546 aa)    
Predicted Functional Partners:
POPTR_0002s25840.1
Annotation not available (119 aa)
     
 
    0.805
POPTR_0010s07570.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PCE3_POPTR]; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (303 aa)
     
 
    0.804
POPTR_0008s17220.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (282 aa)
     
 
    0.804
POPTR_0018s12790.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (233 aa)
         
    0.800
POPTR_0018s04890.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (246 aa)
         
    0.800
POPTR_0014s10730.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (175 aa)
         
    0.800
POPTR_0013s03870.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (246 aa)
         
    0.800
POPTR_0013s03860.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (203 aa)
         
    0.800
POPTR_0010s12990.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (160 aa)
         
    0.800
POPTR_0010s08890.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (297 aa)
         
    0.800
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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