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POPTR_0005s02770.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s02770.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s02770.1Predicted protein (1084 aa)    
Predicted Functional Partners:
POPTR_0003s15140.1
Putative uncharacterized protein POPTRKOR2 [source-UniProtKB/TrEMBL;Acc-B9NBR6_POPTR] (619 aa)
     
 
  0.569
POPTR_0001s11870.1
Endo-1,4-beta-glucanase [source-UniProtKB/TrEMBL;Acc-B9GK28_POPTR] (619 aa)
     
 
  0.569
POPTR_0009s06380.1
Predicted protein; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1482 aa)
         
  0.507
POPTR_0001s27120.1
Predicted protein; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1485 aa)
         
  0.507
POPTR_0003s07600.1
Predicted protein (444 aa)
              0.451
PSD2
Predicted protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine (660 aa)
              0.451
POPTR_0001s17230.1
Uncharacterized protein (240 aa)
              0.451
POPTR_0001s17220.1
Uncharacterized protein (287 aa)
              0.451
POPTR_0007s06010.1
Predicted protein (2116 aa)
     
 
  0.442
POPTR_0005s08190.1
Predicted protein (2151 aa)
     
 
  0.442
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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