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POPTR_0005s04480.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s04480.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s04480.1Predicted protein (223 aa)    
Predicted Functional Partners:
POPTR_0010s22840.1
Chorismate synthase [source-UniProtKB/TrEMBL;Acc-A9PGP7_POPTR] (437 aa)
   
  0.741
POPTR_0008s04040.1
Chorismate synthase [source-UniProtKB/TrEMBL;Acc-B9HLM0_POPTR] (438 aa)
   
  0.741
POPTR_0007s06590.1
Shikimate kinase [source-UniProtKB/TrEMBL;Acc-B9HG21_POPTR] (294 aa)
   
 
  0.720
POPTR_0005s08650.1
Shikimate kinase [source-UniProtKB/TrEMBL;Acc-B9H5B3_POPTR] (294 aa)
   
 
  0.720
POPTR_0002s06190.1
Shikimate kinase [source-UniProtKB/TrEMBL;Acc-B9GT47_POPTR] (265 aa)
   
 
  0.720
POPTR_0005s11300.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PE59_POPTR] (443 aa)
   
 
  0.700
POPTR_0017s08970.1
Shikimate kinase [source-UniProtKB/TrEMBL;Acc-B9N0W2_POPTR] (286 aa)
   
 
  0.673
POPTR_1875s00200.1
Uncharacterized protein (291 aa)
 
   
0.644
POPTR_0008s20060.1
Uncharacterized protein (337 aa)
 
   
0.642
POPTR_0014s13020.1
Dehydroquinate dehydratase/ shikimate dehydrogenase [source-UniProtKB/TrEMBL;Acc-B9I9X4_POPTR] (413 aa)
 
   
0.639
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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