STRINGSTRING
POPTR_0005s06690.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s06690.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s06690.1Predicted protein (1088 aa)    
Predicted Functional Partners:
POPTR_0016s04510.1
Predicted protein (442 aa)
     
  0.998
POPTR_0006s20680.1
Predicted protein (454 aa)
     
  0.998
POPTR_0019s05980.1
Predicted protein (121 aa)
       
  0.987
POPTR_0013s07370.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PA85_POPTR] (122 aa)
       
  0.987
POPTR_0010s06600.1
DNA polymerase alpha subunit B ; May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery (618 aa)
     
  0.987
POPTR_0003s10380.1
Predicted protein (450 aa)
     
  0.986
POPTR_0008s17900.1
Uncharacterized protein (263 aa)
     
  0.986
POPTR_0001s25490.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
  0.984
POPTR_0001s39560.1
Predicted protein (511 aa)
     
  0.983
POPTR_0009s04560.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
  0.983
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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