STRINGSTRING
POPTR_0005s11470.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s11470.1" - Uncharacterized protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s11470.1Uncharacterized protein (169 aa)    
Predicted Functional Partners:
POPTR_0019s11770.1
SET domain protein [source-UniProtKB/TrEMBL;Acc-B9IQN1_POPTR] (295 aa)
     
 
    0.902
POPTR_0016s02600.1
SET domain protein (SDG921), mRNA [source-RefSeq DNA_predicted;Acc-XM_002323165.1] (454 aa)
     
 
    0.902
POPTR_0014s14090.1
SET domain protein [source-UniProtKB/TrEMBL;Acc-B9IA64_POPTR] (368 aa)
     
 
    0.902
POPTR_0010s07480.1
Putative uncharacterized protein SDG949 [source-UniProtKB/TrEMBL;Acc-B9HKW0_POPTR] (699 aa)
     
 
    0.902
POPTR_0006s02840.1
SET domain protein [source-UniProtKB/TrEMBL;Acc-B9IHH8_POPTR] (670 aa)
     
 
    0.902
POPTR_0003s18740.1
SET domain protein [source-UniProtKB/TrEMBL;Acc-B9GXL1_POPTR] (653 aa)
     
 
    0.902
POPTR_0003s08130.1
SET domain protein [source-UniProtKB/TrEMBL;Acc-B9N2W3_POPTR] (976 aa)
     
 
    0.902
POPTR_0002s23890.1
Annotation not available (341 aa)
     
 
    0.902
POPTR_0001s07390.1
SET domain protein [source-UniProtKB/TrEMBL;Acc-B9GLS5_POPTR] (669 aa)
     
 
    0.902
POPTR_0005s20470.1
Uncharacterized protein (1437 aa)
     
 
    0.900
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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