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POPTR_0005s11740.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s11740.1" - Histone H4 [source:UniProtKB/TrEMBL in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s11740.1Histone H4 [source-UniProtKB/TrEMBL;Acc-A9PA83_POPTR] (103 aa)    
Predicted Functional Partners:
POPTR_0013s06450.1
Histone acetyltransferase [source-UniProtKB/TrEMBL;Acc-B9I6D2_POPTR] (463 aa)
     
  0.956
POPTR_0005s14990.1
Silencing group A protein [source-UniProtKB/TrEMBL;Acc-B9GV99_POPTR] (193 aa)
     
 
  0.948
POPTR_0004s09330.1
Silencing group A protein [source-UniProtKB/TrEMBL;Acc-B9H343_POPTR] (190 aa)
     
 
  0.948
POPTR_0017s11460.1
High mobility group family [source-UniProtKB/TrEMBL;Acc-B9IJT6_POPTR] (610 aa)
     
  0.943
POPTR_0004s12290.1
High mobility group family [source-UniProtKB/TrEMBL;Acc-B9H0D7_POPTR] (644 aa)
     
  0.943
POPTR_0017s08230.1
Uncharacterized protein (285 aa)
     
  0.937
POPTR_0011s17180.1
High mobility group family [source-UniProtKB/TrEMBL;Acc-B9N5K1_POPTR] (316 aa)
     
  0.937
POPTR_0005s26800.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PG95_POPTR] (329 aa)
     
  0.937
POPTR_0001s32240.1
Uncharacterized protein (334 aa)
     
  0.937
POPTR_0008s02990.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P8Q5_POPTR]; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (139 aa)
     
  0.924
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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