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POPTR_0005s12060.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s12060.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s12060.1Predicted protein (161 aa)    
Predicted Functional Partners:
CNX5
Predicted protein; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is generated from the pers [...] (464 aa)
       
  0.926
POPTR_0014s18990.1
Predicted protein (108 aa)
     
  0.836
POPTR_0014s15650.1
Predicted protein (103 aa)
     
  0.836
POPTR_0002s21690.1
Predicted protein (105 aa)
     
  0.836
POPTR_0002s21680.1
Predicted protein (103 aa)
     
  0.836
POPTR_0006s14360.1
Uncharacterized protein (93 aa)
     
  0.827
POPTR_0001s16760.1
Predicted protein (110 aa)
     
  0.827
POPTR_0015s12320.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002322281.1] (156 aa)
       
  0.812
POPTR_0014s11040.1
Predicted protein (156 aa)
       
  0.812
POPTR_2697s00200.1
Uncharacterized protein (486 aa)
       
  0.798
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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