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POPTR_0005s15150.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s15150.1" - 50S ribosomal protein L20 in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
POPTR_0005s15150.150S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (126 aa)    
Predicted Functional Partners:
POPTR_0006s18600.1
30S ribosomal protein S18; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PEY2_POPTR]; Belongs to the bacterial ribosomal protein bS18 family (266 aa)
     
 
  0.995
POPTR_0018s11170.1
50S ribosomal protein L35; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PBS9_POPTR]; Belongs to the bacterial ribosomal protein bL35 family (125 aa)
   
 
  0.994
POPTR_0001s15230.1
Ribosomal protein L19 (241 aa)
 
 
  0.992
POPTR_0001s33710.1
Ribosomal protein L27 (194 aa)
   
 
  0.991
POPTR_0012s08870.1
Uncharacterized protein (242 aa)
   
 
  0.990
POPTR_0022s00790.1
annotation not available (149 aa)
     
 
  0.990
POPTR_0016s06740.1
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family (278 aa)
     
 
  0.990
POPTR_0019s11310.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PEU7_POPTR] (225 aa)
     
 
  0.988
POPTR_0015s10770.1
50S ribosomal protein L21 (381 aa)
     
 
  0.988
POPTR_0013s11720.1
Uncharacterized protein (257 aa)
     
 
  0.988
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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