STRINGSTRING
POPTR_0005s15520.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s15520.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s15520.1Uncharacterized protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family (1022 aa)    
Predicted Functional Partners:
POPTR_0015s14260.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PCC6_POPTR] (215 aa)
           
  0.536
POPTR_1359s00200.1
Uncharacterized protein (213 aa)
   
          0.448
POPTR_0017s00780.1
annotation not available (104 aa)
   
          0.448
PtNtr2-4
High-affinity nitrate transporter NRT2 family protein; High affinity nitrate transporter [source-UniProtKB/TrEMBL;Acc-B9HQM0_POPTR] (530 aa)
   
          0.446
POPTR_0019s08680.1
Uncharacterized protein (425 aa)
   
          0.440
POPTR_0019s08820.1
Uncharacterized protein (230 aa)
   
        0.437
CYP716B3
Uncharacterized protein; Cytochrome P450 [source-UniProtKB/TrEMBL;Acc-B9IQE3_POPTR] (476 aa)
   
          0.437
POPTR_0019s08840.1
annotation not available (268 aa)
   
        0.436
POPTR_0019s14410.1
Uncharacterized protein (262 aa)
   
          0.435
POPTR_0018s09560.1
Phosphotransferase; Belongs to the hexokinase family (498 aa)
   
          0.435
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (7%) [HD]