STRINGSTRING
POPTR_0005s15840.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s15840.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s15840.1Predicted protein (323 aa)    
Predicted Functional Partners:
POPTR_0005s24470.1
AP2/ERF domain-containing transcription factor [source-UniProtKB/TrEMBL;Acc-B9H8L2_POPTR] (241 aa)
           
  0.456
POPTR_0002s04010.1
AP2/ERF domain-containing transcription factor [source-UniProtKB/TrEMBL;Acc-B9GS19_POPTR] (239 aa)
           
  0.456
POPTR_0012s07000.1
Predicted protein (487 aa)
              0.451
POPTR_0005s25430.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002306858.1] (217 aa)
              0.451
POPTR_0002s03130.1
Predicted protein (284 aa)
              0.451
POPTR_0015s13840.1
TINY-like protein [source-UniProtKB/TrEMBL;Acc-A9PL86_POPTR] (250 aa)
           
  0.424
POPTR_0012s13880.1
AP2/ERF domain-containing transcription factor [source-UniProtKB/TrEMBL;Acc-B9I4F4_POPTR] (282 aa)
           
  0.424
POPTR_0003s12120.1
AP2/ERF domain-containing transcription factor [source-UniProtKB/TrEMBL;Acc-B9GW61_POPTR] (176 aa)
           
  0.424
POPTR_0001s08740.1
AP2/ERF domain-containing transcription factor [source-UniProtKB/TrEMBL;Acc-B9GKP1_POPTR] (177 aa)
           
  0.424
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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