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POPTR_0005s16180.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s16180.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s16180.1Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (899 aa)    
Predicted Functional Partners:
POPTR_0009s10440.1
Uncharacterized protein (467 aa)
     
 
  0.985
POPTR_0004s14810.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGV2_POPTR] (588 aa)
     
 
  0.985
POPTR_0143s00200.1
High affinity nitrate transporter [source-UniProtKB/TrEMBL;Acc-B9HQM0_POPTR] (530 aa)
     
 
  0.974
POPTR_0015s09310.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9IEW4_POPTR] (508 aa)
     
 
  0.974
POPTR_0015s09290.1
High affinity nitrate transporter [source-UniProtKB/TrEMBL;Acc-B9IEW2_POPTR] (508 aa)
     
 
  0.974
POPTR_0012s08950.1
Hypothetical protein (384 aa)
     
 
  0.974
POPTR_0009s01420.1
High affinity nitrate transporter [source-UniProtKB/TrEMBL;Acc-B9HQL9_POPTR] (530 aa)
     
 
  0.974
POPTR_0001s35030.1
Predicted protein (348 aa)
     
 
  0.974
POPTR_0015s01950.1
Predicted protein (2228 aa)
   
 
  0.968
POPTR_0012s01860.1
Predicted protein (2230 aa)
   
 
  0.968
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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