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POPTR_0005s16270.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s16270.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s16270.1Predicted protein (636 aa)    
Predicted Functional Partners:
POPTR_0002s09010.1
Histone acetyltransferase [source-UniProtKB/TrEMBL;Acc-B9GUG6_POPTR] (445 aa)
     
  0.847
POPTR_0005s16280.1
Histone acetyltransferase [source-UniProtKB/TrEMBL;Acc-B9H794_POPTR] (448 aa)
     
  0.846
POPTR_0002s18240.1
Endoribonuclease Dicer family protein (1967 aa)
     
 
  0.684
POPTR_0005s24530.1
Uncharacterized protein (162 aa)
       
  0.682
POPTR_0002s03980.1
Predicted protein (157 aa)
       
  0.682
POPTR_0018s08340.1
Hypothetical protein (1476 aa)
     
 
  0.677
POPTR_0008s07580.1
Dicer-like protein [source-UniProtKB/TrEMBL;Acc-B9HHX6_POPTR] (1468 aa)
     
 
  0.671
POPTR_0010s18870.1
Dicer-like protein [source-UniProtKB/TrEMBL;Acc-B9HYI3_POPTR] (1408 aa)
     
 
  0.660
POPTR_0001s17930.1
Predicted protein (469 aa)
     
      0.620
POPTR_0019s04940.1
Predicted protein (286 aa)
     
  0.611
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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