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POPTR_0005s16280.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s16280.1" - Histone acetyltransferase [source:UniProtKB/TrEMBL in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s16280.1Histone acetyltransferase [source-UniProtKB/TrEMBL;Acc-B9H794_POPTR] (448 aa)    
Predicted Functional Partners:
POPTR_0019s04940.1
Predicted protein (286 aa)
     
  0.976
POPTR_0003s17260.1
Predicted protein (246 aa)
     
  0.976
POPTR_0005s11640.1
Predicted protein (3881 aa)
     
  0.976
POPTR_0014s14340.1
SET domain protein [source-UniProtKB/TrEMBL;Acc-B9GU95_POPTR] (539 aa)
     
  0.976
POPTR_0007s09550.1
Uncharacterized protein (2838 aa)
     
  0.976
POPTR_0012s02120.1
Hypothetical protein (1123 aa)
     
  0.976
POPTR_0002s17180.1
Putative uncharacterized protein (1050 aa)
     
  0.976
POPTR_0007s09540.1
Uncharacterized protein (497 aa)
       
  0.975
POPTR_0015s01670.1
SET DOMAIN GROUP 29 family protein (1121 aa)
     
  0.975
POPTR_0014s09400.1
Uncharacterized protein (1012 aa)
     
  0.975
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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