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POPTR_0005s20310.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s20310.1" - Putative uncharacterized protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
POPTR_0005s20310.1Putative uncharacterized protein (92 aa)    
Predicted Functional Partners:
POPTR_0014s09740.1
Endoplasmic reticulum [ER]-type calcium ATPase (1045 aa)
     
 
  0.631
POPTR_0014s01500.1
Endoplasmic reticulum [ER]-type calcium ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (694 aa)
     
 
  0.631
POPTR_0009s03080.1
Annotation not available (269 aa)
     
 
  0.631
POPTR_0009s03070.1
Endoplasmic reticulum [ER]-type calcium ATPase (793 aa)
     
 
  0.631
POPTR_0005s19170.1
Endoplasmic reticulum [ER]-type calcium ATPase (971 aa)
     
 
  0.631
POPTR_0002s11820.1
Endoplasmic reticulum [ER]-type calcium ATPase (666 aa)
     
 
  0.631
POPTR_0001s23990.1
Endoplasmic reticulum [ER]-type calcium ATPase (969 aa)
     
 
  0.631
POPTR_0003s05050.1
Predicted protein (159 aa)
       
      0.596
POPTR_0010s06750.1
Predicted protein (485 aa)
       
      0.539
POPTR_0010s01450.1
Predicted protein (275 aa)
       
      0.539
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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