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POPTR_0005s21670.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s21670.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s21670.1Predicted protein (365 aa)    
Predicted Functional Partners:
POPTR_0012s07480.1
5-formyltetrahydrofolate cyclo-ligase [source-UniProtKB/TrEMBL;Acc-B9I331_POPTR] (290 aa)
         
  0.924
POPTR_0012s10940.1
Glycinamide ribonucleotide transformylase [source-UniProtKB/TrEMBL;Acc-B9NFU7_POPTR] (302 aa)
       
  0.909
POPTR_0015s01950.1
Predicted protein (2228 aa)
     
 
  0.656
POPTR_0012s01860.1
Predicted protein (2230 aa)
     
 
  0.656
POPTR_0014s07650.1
Uncharacterized protein (234 aa)
     
  0.647
POPTR_0011s10100.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PIC3_POPTR] (299 aa)
     
  0.647
POPTR_0006s11490.1
Predicted protein (362 aa)
     
  0.647
POPTR_0002s15850.1
Tetrahydrofolate dehydrogenase/cyclohydrolase [source-UniProtKB/TrEMBL;Acc-B9GPY5_POPTR] (367 aa)
     
  0.647
POPTR_0016s03630.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PE46_POPTR] (1472 aa)
   
   
  0.592
POPTR_0006s03660.1
Predicted protein (1628 aa)
   
   
  0.591
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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