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POPTR_0005s21730.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s21730.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s21730.1Uncharacterized protein; Belongs to the protein kinase superfamily (369 aa)    
Predicted Functional Partners:
POPTR_0018s03450.1
WRKY transcription factor 17 family protein (338 aa)
           
  0.598
POPTR_0009s10530.1
Calmodulin-related family protein (185 aa)
       
 
  0.565
POPTR_0014s08640.1
Uncharacterized protein (117 aa)
           
  0.537
POPTR_0002s16640.1
Uncharacterized protein (125 aa)
           
  0.537
POPTR_0005s18230.1
Uncharacterized protein; Belongs to the protein kinase superfamily (342 aa)
   
      0.448
POPTR_0007s10930.1
Uncharacterized protein; Belongs to the protein kinase superfamily (353 aa)
   
      0.442
POPTR_0084s00250.1
Uncharacterized protein (97 aa)
   
 
      0.440
CYP716A3
Uncharacterized protein; Cytochrome P450 [source-UniProtKB/TrEMBL;Acc-B9IN21_POPTR] (399 aa)
   
 
      0.439
CYP716A7P
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9IN25_POPTR] (475 aa)
   
 
      0.437
POPTR_0018s02250.1
Aspartate aminotransferase (466 aa)
   
 
      0.436
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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