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POPTR_0005s23010.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s23010.1" - Uncharacterized protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s23010.1Uncharacterized protein (359 aa)    
Predicted Functional Partners:
POPTR_0006s23840.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9HD16_POPTR] (288 aa)
     
 
  0.736
POPTR_0018s05750.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9IKE0_POPTR] (296 aa)
     
 
  0.729
POPTR_0018s05530.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9IKD6_POPTR] (296 aa)
     
 
  0.729
POPTR_0003s14430.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9GXU7_POPTR] (272 aa)
     
 
  0.729
POPTR_0003s14420.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9GXU6_POPTR] (280 aa)
     
 
  0.729
POPTR_0001s11100.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9GL11_POPTR] (267 aa)
     
 
  0.729
POPTR_0015s00470.1
Predicted protein (346 aa)
       
 
  0.723
POPTR_0012s00640.1
Predicted protein (340 aa)
       
 
  0.723
POPTR_0005s25110.1
Dihydroflavonol 4-reductase [source-UniProtKB/TrEMBL;Acc-B9H4D5_POPTR] (376 aa)
     
   
  0.682
POPTR_0002s03500.1
Dihydroflavonol 4-reductase [source-UniProtKB/TrEMBL;Acc-B9GRL5_POPTR] (346 aa)
     
   
  0.682
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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