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POPTR_0005s23080.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s23080.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s23080.1Uncharacterized protein (926 aa)    
Predicted Functional Partners:
POPTR_0006s24380.1
Uncharacterized protein (331 aa)
     
 
  0.781
POPTR_0011s11930.1
Dynamin family protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (760 aa)
     
 
  0.759
POPTR_0016s03840.1
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes (167 aa)
       
 
  0.755
POPTR_0009s05200.1
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes (167 aa)
       
 
  0.755
POPTR_0006s04020.1
annotation not available (114 aa)
       
 
  0.755
POPTR_0005s20450.1
Tetrachloro-p-hydroquinone reductive dehalogenase-related family protein (267 aa)
       
 
  0.754
POPTR_0003s08020.1
Uncharacterized protein (363 aa)
     
   
  0.748
POPTR_0002s15080.1
Uncharacterized protein (664 aa)
           
  0.741
POPTR_0130s00210.1
AAA-type ATPase family protein (478 aa)
   
 
  0.693
POPTR_0018s08770.1
AAA-type ATPase family protein (477 aa)
   
 
  0.693
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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