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POPTR_0005s25660.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s25660.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
POPTR_0005s25660.1Predicted protein; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (165 aa)    
Predicted Functional Partners:
POPTR_0012s05640.1
Uncharacterized protein (68 aa)
   
  0.997
atpB
F-ATPase subunit beta ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (217 aa)
   
  0.993
POPTR_0010s12680.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PIH5_POPTR]; Produces ATP from ADP in the presence of a proton gradient across the membrane (558 aa)
   
  0.991
POPTR_0008s21750.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002331556.1] (66 aa)
   
  0.991
POPTR_0008s12550.1
Predicted protein; Produces ATP from ADP in the presence of a proton gradient across the membrane (559 aa)
   
  0.991
POPTR_0015s02580.1
Uncharacterized protein (87 aa)
   
  0.989
POPTR_0014s16600.1
Uncharacterized protein (158 aa)
   
  0.989
POPTR_0010s06340.1
Uncharacterized protein (94 aa)
   
  0.989
POPTR_0021s00710.1
Uncharacterized protein (148 aa)
   
  0.987
POPTR_0015s06860.1
Predicted protein (324 aa)
   
  0.987
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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