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POPTR_0005s26080.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s26080.1" - Light-harvesting complex II protein Lhcb1Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
POPTR_0005s26080.1Light-harvesting complex II protein Lhcb1Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PHD4_POPTR] (264 aa)    
Predicted Functional Partners:
POPTR_0010s10350.1
Uncharacterized protein (108 aa)
       
      0.769
POPTR_0002s01740.1
Predicted protein; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (168 aa)
     
   
  0.660
POPTR_0005s26740.1
Predicted protein; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (168 aa)
     
   
  0.622
POPTR_0002s08410.1
Putative uncharacterized protein (272 aa)
     
 
  0.621
POPTR_0004s03160.1
Putative uncharacterized protein (234 aa)
     
   
  0.579
POPTR_0001s11600.1
Putative uncharacterized protein (224 aa)
     
   
  0.530
POPTR_0009s14260.1
Predicted protein (380 aa)
     
 
  0.524
POPTR_0011s03390.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PF82_POPTR] (234 aa)
     
   
  0.523
POPTR_0007s12070.1
Putative uncharacterized protein (332 aa)
     
   
  0.512
POPTR_0001s21740.1
Light-harvesting complex II protein Lhcb6Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PFP4_POPTR] (257 aa)
     
   
0.506
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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