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POPTR_0005s26740.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s26740.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s26740.1Predicted protein; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (168 aa)    
Predicted Functional Partners:
POPTR_0016s11450.1
Predicted protein (282 aa)
       
 
  0.843
POPTR_0002s01740.1
Predicted protein; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (168 aa)
   
 
 
0.813
POPTR_0001s11600.1
Putative uncharacterized protein (224 aa)
     
   
  0.810
POPTR_0008s15100.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PI11_POPTR] (204 aa)
     
   
  0.763
POPTR_0010s09960.1
Putative uncharacterized protein (201 aa)
     
   
  0.761
POPTR_0006s10040.1
Light-harvesting complex II protein Lhcb4 [source-UniProtKB/TrEMBL;Acc-B9HCM1_POPTR] (285 aa)
     
   
  0.735
POPTR_0008s06720.1
Light-harvesting complex II protein Lhcb8 [source-UniProtKB/TrEMBL;Acc-B9HHN0_POPTR] (275 aa)
     
   
  0.733
POPTR_0007s04160.1
Predicted protein (172 aa)
     
   
  0.733
POPTR_0016s12260.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PFN3_POPTR] (283 aa)
     
   
  0.732
POPTR_0005s06420.1
Predicted protein (172 aa)
     
   
  0.732
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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