STRINGSTRING
POPTR_0005s26910.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s26910.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s26910.1Predicted protein (922 aa)    
Predicted Functional Partners:
POPTR_0006s16110.1
Uncharacterized protein (478 aa)
     
  0.915
POPTR_0130s00210.1
Predicted protein (478 aa)
     
  0.912
POPTR_0018s08770.1
Predicted protein (477 aa)
     
  0.912
CNX5
Predicted protein; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is generated from the pers [...] (464 aa)
     
  0.867
POPTR_0016s07460.1
Predicted protein (174 aa)
     
    0.859
POPTR_0010s24760.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PA24_POPTR] (142 aa)
     
    0.859
POPTR_0008s01820.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PA78_POPTR] (140 aa)
     
    0.859
POPTR_0011s17240.1
Predicted protein (1205 aa)
     
  0.855
POPTR_0005s21110.1
Predicted protein (1083 aa)
     
  0.853
POPTR_0002s07170.1
Predicted protein (1084 aa)
     
  0.853
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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