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POPTR_0005s27140.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0005s27140.1" - Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0005s27140.1Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PH60_POPTR] (343 aa)    
Predicted Functional Partners:
POPTR_0015s07690.1
Predicted protein (528 aa)
     
   
  0.593
POPTR_0014s14400.1
Predicted protein (353 aa)
   
        0.510
POPTR_2108s00210.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002327933.1] (265 aa)
   
          0.490
POPTR_0017s05900.1
Predicted protein (263 aa)
   
          0.487
POPTR_0007s02000.1
Predicted protein (261 aa)
   
        0.483
POPTR_0726s00210.1
Uncharacterized protein (180 aa)
   
          0.473
POPTR_0016s09350.1
Predicted protein (215 aa)
   
        0.447
POPTR_0002s08280.1
Predicted protein (430 aa)
     
   
  0.444
POPTR_0013s08250.1
Predicted protein (209 aa)
   
        0.445
POPTR_0004s20320.1
Predicted protein (203 aa)
   
        0.444
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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