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POPTR_0006s12110.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0006s12110.1" - Permease family protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0006s12110.1Permease family protein (507 aa)    
Predicted Functional Partners:
POPTR_0003s14170.1
Glutaredoxin family protein (364 aa)
     
        0.877
POPTR_0001s10870.1
annotation not available (186 aa)
     
        0.875
POPTR_0015s10170.1
Uncharacterized protein; Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 (536 aa)
     
   
  0.857
POPTR_0006s04980.1
Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (458 aa)
           
  0.856
POPTR_0014s01540.1
Xanthine/uracil permease family protein; Nucleobase ascorbate transporter (571 aa)
   
   
  0.851
POPTR_0009s07200.1
Dihydropyrimidinase family protein (531 aa)
 
 
  0.836
POPTR_0001s28020.1
Dihydropyrimidinase family protein (532 aa)
 
 
  0.835
POPTR_0008s10610.1
Seed maturation protein PM36 (225 aa)
           
  0.798
POPTR_0003s10300.1
Urea active transporter-like protein, solute-sodium symporter; Belongs to the sodium-solute symporter (SSF) (TC 2.A.21) family (707 aa)
         
  0.785
POPTR_0004s04190.1
Uncharacterized protein (504 aa)
   
 
  0.778
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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