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POPTR_0007s01320.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0007s01320.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0007s01320.1Uncharacterized protein (348 aa)    
Predicted Functional Partners:
POPTR_0006s02290.1
Uncharacterized protein; Belongs to the heat shock protein 70 family (899 aa)
 
 
  0.768
POPTR_0016s02100.1
Uncharacterized protein; Belongs to the heat shock protein 70 family (881 aa)
 
 
  0.767
POPTR_0001s03420.1
Heat shock protein 70 cognate; Belongs to the heat shock protein 70 family (655 aa)
 
 
  0.681
POPTR_0003s18220.1
Heat shock protein 70 cognate; Belongs to the heat shock protein 70 family (651 aa)
 
 
  0.680
POPTR_0001s03410.1
Heat shock protein 70 cognate; Belongs to the heat shock protein 70 family (655 aa)
 
 
  0.680
POPTR_0003s05450.1
Heat shock protein 70; Belongs to the heat shock protein 70 family (858 aa)
 
 
  0.638
POPTR_0001s18040.1
Heat shock protein 70; Belongs to the heat shock protein 70 family (852 aa)
 
 
  0.636
POPTR_0004s01640.1
Uncharacterized protein; Belongs to the heat shock protein 70 family (757 aa)
 
 
  0.634
POPTR_0011s14240.1
Uncharacterized protein; Belongs to the heat shock protein 70 family (770 aa)
 
 
  0.634
POPTR_0012s02470.1
BiP isoform A family protein; Belongs to the heat shock protein 70 family (668 aa)
 
 
  0.633
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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