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POPTR_0008s03750.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0008s03750.1" - GCN5-related N-acetyltransferase family protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0008s03750.1GCN5-related N-acetyltransferase family protein; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PDR2_POPTR] (236 aa)    
Predicted Functional Partners:
POPTR_0006s12290.1
Transducin family protein (959 aa)
           
  0.745
POPTR_0011s06070.1
D-aminoacyl-tRNA deacylase (201 aa)
         
  0.672
DHFR-TS-2
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (528 aa)
         
  0.670
DHFR-TS-1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (528 aa)
         
  0.670
POPTR_0020s00520.1
Uncharacterized protein (843 aa)
         
  0.664
POPTR_0014s10830.1
Epimerase-related family protein (453 aa)
     
   
  0.658
POPTR_0013s00400.1
Uncharacterized protein (451 aa)
     
   
  0.658
POPTR_0009s07040.1
Cysteine desulfurase family protein (469 aa)
     
   
  0.658
POPTR_0008s00570.1
Uncharacterized protein (194 aa)
     
   
  0.658
POPTR_0007s15360.1
Uncharacterized protein (452 aa)
     
   
  0.658
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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