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POPTR_0008s14360.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0008s14360.1" - Oxygenase-related family protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0008s14360.1Oxygenase-related family protein (310 aa)    
Predicted Functional Partners:
POPTR_0001s35530.1
GHMP kinase-related family protein (361 aa)
         
  0.976
POPTR_0009s13780.1
CDP-diacylglycerol--inositol 3-phosphatidyltransferase (231 aa)
         
  0.932
POPTR_0004s18160.1
annotation not available (185 aa)
         
  0.932
POPTR_0009s05080.1
Uncharacterized protein (384 aa)
       
    0.901
POPTR_0001s25860.1
Uncharacterized protein (381 aa)
       
    0.901
POPTR_0016s01230.1
Inositol-1-monophosphatase (261 aa)
         
  0.813
POPTR_0016s01220.1
Inositol-1-monophosphatase; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PH10_POPTR] (258 aa)
         
  0.813
POPTR_0015s15480.1
Inositol-1-monophosphatase (360 aa)
         
  0.813
POPTR_0014s05340.1
annotation not available (106 aa)
         
  0.813
POPTR_0012s12120.1
Inositol-1-monophosphatase (373 aa)
         
  0.813
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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