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POPTR_0008s20340.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0008s20340.1" - Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0008s20340.1Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PAW4_POPTR] (345 aa)    
Predicted Functional Partners:
POPTR_0011s11700.1
Annotation not available (445 aa)
     
  0.950
POPTR_0001s40800.1
Predicted protein (419 aa)
     
  0.950
POPTR_0011s11710.1
Kinase family protein (296 aa)
     
  0.949
POPTR_0001s40850.1
Predicted protein (283 aa)
       
  0.948
POPTR_0001s40810.1
Annotation not available (304 aa)
       
  0.948
POPTR_0010s16490.1
Predicted protein (822 aa)
     
  0.801
POPTR_0003s14600.1
Predicted protein (688 aa)
     
  0.759
POPTR_0001s11280.1
Hypothetical protein (791 aa)
     
  0.756
POPTR_0001s34910.1
Predicted protein (694 aa)
     
  0.754
POPTR_0017s14560.1
Annotation not available (840 aa)
       
 
  0.749
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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