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POPTR_0009s06970.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0009s06970.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
POPTR_0009s06970.1Uncharacterized protein; Belongs to the cytochrome P450 family (266 aa)    
Predicted Functional Partners:
CYP704B3
Cytochrome P450 [source-UniProtKB/TrEMBL;Acc-B9HI89_POPTR] (482 aa)
   
     
  0.497
POPTR_0012s09880.1
Uncharacterized protein (631 aa)
   
     
  0.494
CYP94B7
Cytochrome P450 [source-UniProtKB/TrEMBL;Acc-B9GJT1_POPTR] (500 aa)
   
     
  0.488
CYP86C5v1
Cytochrome P450 [source-UniProtKB/TrEMBL;Acc-B9P527_POPTR] (503 aa)
   
     
  0.464
CYP86C6
Cytochrome P450 [source-UniProtKB/TrEMBL;Acc-B9HTQ1_POPTR] (529 aa)
   
     
  0.462
CYP711A8
Uncharacterized protein; Cytochrome P450 [source-UniProtKB/TrEMBL;Acc-B9HDD3_POPTR] (529 aa)
   
 
 
  0.448
POPTR_0012s13120.1
annotation not available (137 aa)
   
        0.439
CYP715A2-2
Uncharacterized protein; Cytochrome P450 [source-UniProtKB/TrEMBL;Acc-B9NI13_POPTR] (385 aa)
   
        0.432
POPTR_0022s00670.1
60S ribosomal protein L3; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PCQ3_POPTR]; Belongs to the universal ribosomal protein uL3 family (389 aa)
   
          0.426
POPTR_0011s10320.1
Cytochrome P450 (125 aa)
   
          0.425
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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