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STRINGSTRING
POPTR_0010s11160.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0010s11160.1" - Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0010s11160.1Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PFF0_POPTR] (422 aa)    
Predicted Functional Partners:
POPTR_0018s09190.1
Uncharacterized protein (1082 aa)
     
 
  0.903
POPTR_0006s04960.1
Magnesium chelatase subunit family protein; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PEB4_POPTR] (1364 aa)
           
  0.741
PGE901
FERTILIZATION-INDEPENDENT ENDOSPERM family protein; Polycomb group protein [source-UniProtKB/TrEMBL;Acc-B9I7G3_POPTR] (371 aa)
       
 
  0.733
CYP98A27
Cytochrome P450 98A3 family protein; Coumaroyl 3-hydroxylaseCytochrome P450 [source-UniProtKB/TrEMBL;Acc-B2Z6P3_POPTR] (508 aa)
     
 
  0.614
C3H2
Uncharacterized protein; P-coumaroyl shikimate 3’-hydroxylase [source-UniProtKB/TrEMBL;Acc-B9IHL6_POPTR]; Belongs to the cytochrome P450 family (509 aa)
       
 
  0.605
C3H3
Uncharacterized protein; P-coumaroyl shikimate 3’-hydroxylase [source-UniProtKB/TrEMBL;Acc-B9P5S7_POPTR]; Belongs to the cytochrome P450 family (509 aa)
       
 
  0.605
POPTR_0001s33510.1
Uncharacterized protein (430 aa)
           
  0.588
POPTR_0014s12640.1
annotation not available (260 aa)
           
  0.548
POPTR_0002s20780.1
Uncharacterized protein (386 aa)
           
  0.548
POPTR_0002s24730.1
Forkhead-associated domain-containing family protein (316 aa)
     
 
  0.512
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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