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STRINGSTRING
POPTR_0010s12010.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0010s12010.1" - annotation not available in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0010s12010.1annotation not available (971 aa)    
Predicted Functional Partners:
POPTR_0009s04960.2
Villin 1 family protein; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PHE8_POPTR] (902 aa)
     
   
  0.801
POPTR_0002s24440.1
annotation not available (247 aa)
           
  0.789
POPTR_0006s04720.1
Uncharacterized protein; P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (758 aa)
           
  0.654
POPTR_0015s03640.1
annotation not available (965 aa)
           
  0.608
POPTR_0012s05330.1
Kinesin motor family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (847 aa)
           
  0.608
POPTR_0003s12790.1
Kinesin motor family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1133 aa)
           
  0.608
POPTR_0001s09410.1
Kinesin motor family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1018 aa)
           
  0.608
POPTR_0014s12060.1
Kinesin motor family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (957 aa)
     
   
  0.589
POPTR_0005s02100.1
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (937 aa)
     
   
  0.571
POPTR_0002s25560.1
Myosin heavy chain family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family (1513 aa)
     
 
  0.559
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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