• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
POPTR_0010s15640.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0010s15640.1" - Enoyl-CoA hydratase/isomerase family protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0010s15640.1Enoyl-CoA hydratase/isomerase family protein (264 aa)    
Predicted Functional Partners:
POPTR_0001s40920.1
3-hydroxyacyl-CoA dehydrogenase family protein (266 aa)
 
   
  0.955
POPTR_0009s10380.1
Methylcrotonyl-CoA carboxylase beta chain family protein (573 aa)
   
   
  0.927
POPTR_0005s19390.1
Uncharacterized protein; acetyl-CoA carboxylase carboxyl transferase subunit beta (100 aa)
   
   
  0.927
POPTR_0007s05520.1
annotation not available (372 aa)
     
   
  0.881
POPTR_0005s07770.1
annotation not available (372 aa)
     
   
  0.881
POPTR_0011s13890.1
Electron transfer flavoprotein alpha subunit (349 aa)
   
 
  0.869
POPTR_0006s00630.1
Truncated acetyl Co-A acetyltransferase-like family protein; Belongs to the thiolase family (412 aa)
 
 
  0.839
POPTR_0014s16670.1
Truncated acetyl Co-A acetyltransferase-like family protein; Belongs to the thiolase family (401 aa)
 
 
  0.838
POPTR_0009s01690.1
ISOVALERYL-COA-DEHYDROGENASE family protein (420 aa)
 
 
  0.835
POPTR_0018s06640.1
Phenylalanyl-tRNA synthetase beta chain family protein (595 aa)
     
        0.824
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (7%) [HD]