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POPTR_0010s16580.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0010s16580.1" - Purple acid phosphatase in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0010s16580.1Purple acid phosphatase (604 aa)    
Predicted Functional Partners:
POPTR_0009s06380.1
Predicted protein; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1482 aa)
         
  0.643
POPTR_0001s27120.1
Predicted protein; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1485 aa)
         
  0.643
POPTR_0003s01150.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGH5_POPTR] (531 aa)
       
    0.572
POPTR_0011s04330.1
Predicted protein (494 aa)
       
    0.534
POPTR_0010s26210.1
Predicted protein (750 aa)
       
    0.534
POPTR_0008s00270.1
Predicted protein (782 aa)
       
    0.534
POPTR_0004s24150.1
Predicted protein (627 aa)
       
    0.534
POPTR_0002s16440.1
Predicted protein (375 aa)
       
    0.534
POPTR_0019s03140.1
Uncharacterized protein (141 aa)
           
  0.454
POPTR_0015s05350.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P960_POPTR] (335 aa)
           
  0.454
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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