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POPTR_0011s09360.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0011s09360.1" - MULTIDRUG RESISTANCE-ASSOCIATED protein 2 in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0011s09360.1MULTIDRUG RESISTANCE-ASSOCIATED protein 2 (470 aa)    
Predicted Functional Partners:
POPTR_0005s24740.1
Predicted protein (341 aa)
   
 
  0.763
POPTR_0002s03850.1
Predicted protein (341 aa)
   
 
  0.763
POPTR_0018s09190.1
Predicted protein (1082 aa)
 
   
  0.690
POPTR_0015s07070.1
Uncharacterized protein (416 aa)
   
     
  0.658
POPTR_0130s00210.1
Predicted protein (478 aa)
       
  0.654
POPTR_0018s08770.1
Predicted protein (477 aa)
       
  0.654
POPTR_0006s16110.1
Uncharacterized protein (478 aa)
       
  0.654
POPTR_0004s12180.1
Uncharacterized protein (332 aa)
   
     
  0.653
POPTR_0228s00200.1
Uncharacterized protein (822 aa)
   
   
  0.647
POPTR_0001s44350.1
Multidrug/pheromone exporter, MDR family, ABC transporter family (100 aa)
   
     
  0.631
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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