STRINGSTRING
POPTR_0012s12700.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0012s12700.1" - Pectinesterase in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0012s12700.1Pectinesterase (165 aa)    
Predicted Functional Partners:
POPTR_0016s08140.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PB95_POPTR] (386 aa)
   
   
    0.928
POPTR_0008s04850.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P824_POPTR] (327 aa)
   
   
    0.928
POPTR_0006s23090.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PIC9_POPTR] (385 aa)
   
   
    0.928
POPTR_0011s09580.1
Predicted protein (399 aa)
   
   
    0.921
POPTR_0021s00250.1
Predicted protein (393 aa)
   
   
    0.921
POPTR_0011s00240.1
Predicted protein (393 aa)
   
   
    0.920
POPTR_0004s00870.1
Predicted protein (392 aa)
   
   
    0.920
POPTR_0001s35960.1
Predicted protein (403 aa)
   
   
    0.920
POPTR_0012s09310.1
Predicted protein (403 aa)
   
   
    0.919
POPTR_0015s09930.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P832_POPTR] (403 aa)
   
   
    0.919
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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