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POPTR_0013s11880.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0013s11880.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0013s11880.1Uncharacterized protein (351 aa)    
Predicted Functional Partners:
POPTR_0009s04560.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
  0.959
POPTR_0001s25490.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
  0.959
POPTR_0001s22140.1
Predicted protein (981 aa)
   
  0.939
POPTR_0004s09310.1
Predicted protein (1142 aa)
     
  0.924
POPTR_0018s00860.1
Predicted protein (2173 aa)
   
  0.907
POPTR_0001s41800.1
Predicted protein (747 aa)
   
  0.856
POPTR_0013s15710.1
Predicted protein (888 aa)
   
  0.803
POPTR_0010s06660.1
Predicted protein (921 aa)
   
  0.803
POPTR_0005s10920.1
Predicted protein (752 aa)
   
  0.803
POPTR_0005s02650.1
Predicted protein (1048 aa)
   
  0.803
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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