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POPTR_0014s00860.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0014s00860.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0014s00860.1Uncharacterized protein (257 aa)    
Predicted Functional Partners:
POPTR_0007s13200.1
Predicted protein (414 aa)
 
   
  0.538
POPTR_0016s09300.1
Predicted protein (606 aa)
   
   
  0.527
POPTR_0014s01000.1
Predicted protein (612 aa)
              0.512
POPTR_0007s14900.1
Predicted protein (608 aa)
              0.512
POPTR_0015s07690.1
Predicted protein (528 aa)
   
   
  0.509
POPTR_0013s01030.1
Predicted protein (968 aa)
         
  0.489
POPTR_0005s01760.1
Predicted protein (950 aa)
         
  0.489
POPTR_0003s08420.1
Predicted protein; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import (893 aa)
         
  0.489
POPTR_0001s03160.1
Predicted protein; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import (893 aa)
         
  0.489
POPTR_0015s01520.1
Predicted protein (572 aa)
         
  0.485
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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