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POPTR_0015s03730.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0015s03730.1" - VQ motif-containing family protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0015s03730.1VQ motif-containing family protein (200 aa)    
Predicted Functional Partners:
POPTR_0014s00870.1
Uncharacterized protein (195 aa)
     
 
  0.738
POPTR_0007s14810.1
VQ motif-containing family protein (193 aa)
     
 
  0.738
POPTR_0005s00820.1
WAT1-related protein (374 aa)
           
  0.683
POPTR_0004s14180.1
Uncharacterized protein (179 aa)
           
  0.647
POPTR_0014s11850.1
Uncharacterized protein (186 aa)
           
  0.603
POPTR_0002s19990.1
Uncharacterized protein (187 aa)
           
  0.603
POPTR_0011s11910.1
Uncharacterized protein (236 aa)
     
   
  0.598
POPTR_0001s40990.1
Uncharacterized protein (234 aa)
     
   
  0.598
POPTR_0016s01940.1
VQ motif-containing family protein (250 aa)
     
   
  0.579
POPTR_0006s00810.1
VQ motif-containing family protein (253 aa)
     
   
  0.579
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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